KRC23837.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

KRC23837.1

Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)

Predicted Functional Partners:

KRC16836.1

0.985

KRC18474.1

0.973

KRC20102.1

0.964

KRC19161.1

0.924

KRC14790.1

0.924

KRC18475.1

0.924

KRC18294.1

0.918

KRC18508.1

0.916

KRC18293.1

0.908

KRC23367.1

0.898

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14790.1	KRC16836.1	ASE31_08550	ASE31_06895	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC14790.1	KRC18293.1	ASE31_08550	ASE31_27170	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
KRC14790.1	KRC18294.1	ASE31_08550	ASE31_27180	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
KRC14790.1	KRC18474.1	ASE31_08550	ASE31_28210	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KRC14790.1	KRC18475.1	ASE31_08550	ASE31_28215	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KRC14790.1	KRC18508.1	ASE31_08550	ASE31_28220	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.	0.917
KRC14790.1	KRC20102.1	ASE31_08550	ASE31_26370	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KRC14790.1	KRC23367.1	ASE31_08550	ASE31_01775	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
KRC14790.1	KRC23837.1	ASE31_08550	ASE31_04430	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
KRC16836.1	KRC14790.1	ASE31_06895	ASE31_08550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC16836.1	KRC18293.1	ASE31_06895	ASE31_27170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
KRC16836.1	KRC18294.1	ASE31_06895	ASE31_27180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC16836.1	KRC18474.1	ASE31_06895	ASE31_28210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC16836.1	KRC18475.1	ASE31_06895	ASE31_28215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC16836.1	KRC18508.1	ASE31_06895	ASE31_28220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.	0.978
KRC16836.1	KRC19161.1	ASE31_06895	ASE31_05895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC16836.1	KRC20102.1	ASE31_06895	ASE31_26370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC16836.1	KRC23367.1	ASE31_06895	ASE31_01775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC16836.1	KRC23837.1	ASE31_06895	ASE31_04430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KRC18293.1	KRC14790.1	ASE31_27170	ASE31_08550	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939