Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRC17833.1 | KRC23840.1 | ASE31_28950 | ASE31_04455 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
| KRC17833.1 | KRC24312.1 | ASE31_28950 | ASE31_21035 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.864 |
| KRC17833.1 | argD | ASE31_28950 | ASE31_26235 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.926 |
| KRC17833.1 | argG | ASE31_28950 | ASE31_05455 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Argininosuccinate synthase; Catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.404 |
| KRC17833.1 | argJ | ASE31_28950 | ASE31_07260 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.401 |
| KRC17833.1 | dapF | ASE31_28950 | ASE31_15050 | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.517 |
| KRC20081.1 | KRC23840.1 | ASE31_26230 | ASE31_04455 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.756 |
| KRC20081.1 | KRC24312.1 | ASE31_26230 | ASE31_21035 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
| KRC20081.1 | KRC27374.1 | ASE31_26230 | ASE31_18425 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | 0.971 |
| KRC20081.1 | KRC27796.1 | ASE31_26230 | ASE31_13350 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| KRC20081.1 | argD | ASE31_26230 | ASE31_26235 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.994 |
| KRC20081.1 | argG | ASE31_26230 | ASE31_05455 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.997 |
| KRC20081.1 | argJ | ASE31_26230 | ASE31_07260 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.997 |
| KRC20081.1 | dapF | ASE31_26230 | ASE31_15050 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.583 |
| KRC23840.1 | KRC17833.1 | ASE31_04455 | ASE31_28950 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
| KRC23840.1 | KRC20081.1 | ASE31_04455 | ASE31_26230 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.756 |
| KRC23840.1 | KRC24312.1 | ASE31_04455 | ASE31_21035 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
| KRC23840.1 | KRC26990.1 | ASE31_04455 | ASE31_16240 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | PLP-dependent lyase/thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| KRC23840.1 | KRC27374.1 | ASE31_04455 | ASE31_18425 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | 0.748 |
| KRC23840.1 | KRC27796.1 | ASE31_04455 | ASE31_13350 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.789 |
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