STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC24035.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
KRC19244.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.907
KRC23850.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
KRC23531.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.644
KRC19042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.632
KRC29502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.632
KRC29503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.632
KRC29504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.632
KRC29505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.632
KRC29506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.632
KRC21455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.632
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.