STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC19130.1DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)    
Predicted Functional Partners:
KRC12973.1
DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.896
KRC14831.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.743
KRC29584.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.743
KRC20815.1
Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.743
KRC28197.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.702
KRC20783.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.689
KRC19207.1
Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.649
KRC27185.1
Lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.529
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.434
KRC19133.1
2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.432
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.