KRC19313.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC19313.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)

Predicted Functional Partners:

KRC19358.1

0.977

KRC19359.1

0.971

KRC27930.1

0.882

KRC11911.1

0.868

KRC11844.1

0.867

KRC24338.1

0.862

KRC29494.1

0.850

KRC11916.1

0.849

KRC11877.1

0.843

KRC11840.1

0.838

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11840.1	KRC11844.1	ASE31_11690	ASE31_11710	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
KRC11840.1	KRC11877.1	ASE31_11690	ASE31_11900	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KRC11840.1	KRC11911.1	ASE31_11690	ASE31_11675	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
KRC11840.1	KRC11916.1	ASE31_11690	ASE31_11880	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
KRC11840.1	KRC19313.1	ASE31_11690	ASE31_06790	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
KRC11840.1	KRC19358.1	ASE31_11690	ASE31_06785	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.595
KRC11840.1	KRC19359.1	ASE31_11690	ASE31_06795	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
KRC11840.1	KRC24338.1	ASE31_11690	ASE31_21165	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
KRC11840.1	KRC27930.1	ASE31_11690	ASE31_14115	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.611
KRC11840.1	KRC29494.1	ASE31_11690	ASE31_12415	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
KRC11844.1	KRC11840.1	ASE31_11710	ASE31_11690	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
KRC11844.1	KRC11877.1	ASE31_11710	ASE31_11900	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
KRC11844.1	KRC11911.1	ASE31_11710	ASE31_11675	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
KRC11844.1	KRC11916.1	ASE31_11710	ASE31_11880	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KRC11844.1	KRC19313.1	ASE31_11710	ASE31_06790	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
KRC11844.1	KRC19359.1	ASE31_11710	ASE31_06795	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
KRC11877.1	KRC11840.1	ASE31_11900	ASE31_11690	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KRC11877.1	KRC11844.1	ASE31_11900	ASE31_11710	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
KRC11877.1	KRC11911.1	ASE31_11900	ASE31_11675	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
KRC11877.1	KRC11916.1	ASE31_11900	ASE31_11880	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.816