STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC16931.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
KRC16997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.994
KRC16932.1
Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.961
KRC16999.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
KRC16933.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
KRC22638.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.923
KRC22507.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
KRC22508.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
KRC21432.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
KRC21433.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.906
KRC16998.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.666
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.