STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC16941.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
KRC30578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
   
 0.976
KRC23612.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.767
KRC23908.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.747
KRC17000.1
Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.709
KRC16944.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
KRC16945.1
Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
KRC16943.1
Pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.669
KRC16942.1
Pilus assembly protein PilP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.666
KRC26984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.645
KRC22506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.640
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.