STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC14743.1Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (848 aa)    
Predicted Functional Partners:
KRC14744.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KRC24014.1
DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.785
KRC12595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.785
rep
ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
   
  0.785
KRC14729.1
Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
KRC28134.1
General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KRC18263.1
Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
KRC27253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.715
KRC12964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
KRC28213.1
General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.