KRC15010.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

KRC15010.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)

Predicted Functional Partners:

KRC20816.1

0.753

KRC11874.1

0.708

KRC27798.1

0.702

KRC19313.1

0.701

KRC24354.1

0.686

KRC27931.1

0.648

KRC11878.1

0.639

KRC20363.1

0.639

KRC16836.1

0.633

KRC27930.1

0.619

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11874.1	KRC11878.1	ASE31_11885	ASE31_11905	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
KRC11874.1	KRC15010.1	ASE31_11885	ASE31_08320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC11874.1	KRC19313.1	ASE31_11885	ASE31_06790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC11874.1	KRC20363.1	ASE31_11885	ASE31_25635	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KRC11874.1	KRC20816.1	ASE31_11885	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KRC11874.1	KRC27930.1	ASE31_11885	ASE31_14115	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
KRC11874.1	KRC27931.1	ASE31_11885	ASE31_14120	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
KRC11878.1	KRC11874.1	ASE31_11905	ASE31_11885	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
KRC11878.1	KRC15010.1	ASE31_11905	ASE31_08320	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
KRC11878.1	KRC19313.1	ASE31_11905	ASE31_06790	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
KRC11878.1	KRC20816.1	ASE31_11905	ASE31_24335	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KRC11878.1	KRC27930.1	ASE31_11905	ASE31_14115	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
KRC11878.1	KRC27931.1	ASE31_11905	ASE31_14120	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
KRC15010.1	KRC11874.1	ASE31_08320	ASE31_11885	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC15010.1	KRC11878.1	ASE31_08320	ASE31_11905	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
KRC15010.1	KRC16836.1	ASE31_08320	ASE31_06895	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
KRC15010.1	KRC19313.1	ASE31_08320	ASE31_06790	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
KRC15010.1	KRC20363.1	ASE31_08320	ASE31_25635	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
KRC15010.1	KRC20816.1	ASE31_08320	ASE31_24335	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
KRC15010.1	KRC24354.1	ASE31_08320	ASE31_21285	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686