KRC14756.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC14756.1

Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)

Predicted Functional Partners:

KRC16836.1

0.912

KRC17491.1

0.879

KRC18234.1

0.864

KRC21390.1

0.846

KRC24869.1

0.845

KRC21944.1

0.843

KRC29450.1

0.828

KRC17454.1

0.828

KRC18294.1

0.824

KRC14942.1

0.784

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14756.1	KRC14942.1	ASE31_08355	ASE31_09445	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
KRC14756.1	KRC16836.1	ASE31_08355	ASE31_06895	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
KRC14756.1	KRC17454.1	ASE31_08355	ASE31_29980	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
KRC14756.1	KRC17491.1	ASE31_08355	ASE31_30220	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
KRC14756.1	KRC18234.1	ASE31_08355	ASE31_26840	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.864
KRC14756.1	KRC18294.1	ASE31_08355	ASE31_27180	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KRC14756.1	KRC21390.1	ASE31_08355	ASE31_23280	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KRC14756.1	KRC21944.1	ASE31_08355	ASE31_22915	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
KRC14756.1	KRC24869.1	ASE31_08355	ASE31_20610	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
KRC14756.1	KRC29450.1	ASE31_08355	ASE31_12145	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
KRC14942.1	KRC14756.1	ASE31_09445	ASE31_08355	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
KRC14942.1	KRC16836.1	ASE31_09445	ASE31_06895	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC17454.1	ASE31_09445	ASE31_29980	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC17491.1	ASE31_09445	ASE31_30220	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC18234.1	ASE31_09445	ASE31_26840	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.597
KRC14942.1	KRC18294.1	ASE31_09445	ASE31_27180	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC21390.1	ASE31_09445	ASE31_23280	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC21944.1	ASE31_09445	ASE31_22915	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC24869.1	ASE31_09445	ASE31_20610	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14942.1	KRC29450.1	ASE31_09445	ASE31_12145	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999