KRC14873.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

KRC14873.1

Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)

Predicted Functional Partners:

KRC14870.1

0.890

KRC27853.1

0.879

KRC14872.1

0.851

KRC17491.1

0.851

KRC29450.1

0.824

KRC16836.1

0.820

KRC24781.1

0.812

KRC17454.1

0.801

KRC19166.1

0.797

ASE31_26155

0.793

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE31_26155	KRC14870.1	ASE31_26155	ASE31_09030	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ASE31_26155	KRC14873.1	ASE31_26155	ASE31_09045	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
ASE31_26155	KRC16836.1	ASE31_26155	ASE31_06895	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE31_26155	KRC17454.1	ASE31_26155	ASE31_29980	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE31_26155	KRC17491.1	ASE31_26155	ASE31_30220	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE31_26155	KRC19166.1	ASE31_26155	ASE31_05925	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
ASE31_26155	KRC24781.1	ASE31_26155	ASE31_20120	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ASE31_26155	KRC27853.1	ASE31_26155	ASE31_13675	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
ASE31_26155	KRC29450.1	ASE31_26155	ASE31_12145	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14870.1	ASE31_26155	ASE31_09030	ASE31_26155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
KRC14870.1	KRC14872.1	ASE31_09030	ASE31_09040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
KRC14870.1	KRC14873.1	ASE31_09030	ASE31_09045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
KRC14870.1	KRC16836.1	ASE31_09030	ASE31_06895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KRC14870.1	KRC17454.1	ASE31_09030	ASE31_29980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
KRC14870.1	KRC17491.1	ASE31_09030	ASE31_30220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KRC14870.1	KRC19166.1	ASE31_09030	ASE31_05925	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
KRC14870.1	KRC24781.1	ASE31_09030	ASE31_20120	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
KRC14870.1	KRC27853.1	ASE31_09030	ASE31_13675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
KRC14870.1	KRC29450.1	ASE31_09030	ASE31_12145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
KRC14872.1	KRC14870.1	ASE31_09040	ASE31_09030	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671