KRC14912.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

KRC14912.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)

Predicted Functional Partners:

KRC14913.1

0.740

KRC23852.1

0.691

KRC23853.1

0.675

KRC19088.1

0.654

KRC23301.1

0.624

KRC18425.1

0.614

KRC27233.1

0.610

KRC23857.1

0.600

KRC29450.1

0.591

KRC14911.1

0.587

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14911.1	KRC14912.1	ASE31_09260	ASE31_09265	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KRC14911.1	KRC14913.1	ASE31_09260	ASE31_09270	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
KRC14912.1	KRC14911.1	ASE31_09265	ASE31_09260	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KRC14912.1	KRC14913.1	ASE31_09265	ASE31_09270	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
KRC14912.1	KRC18425.1	ASE31_09265	ASE31_27930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.614
KRC14912.1	KRC19088.1	ASE31_09265	ASE31_05475	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
KRC14912.1	KRC23301.1	ASE31_09265	ASE31_01405	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
KRC14912.1	KRC23852.1	ASE31_09265	ASE31_04530	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
KRC14912.1	KRC23853.1	ASE31_09265	ASE31_04535	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KRC14912.1	KRC23857.1	ASE31_09265	ASE31_04555	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
KRC14912.1	KRC27233.1	ASE31_09265	ASE31_17630	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KRC14912.1	KRC29450.1	ASE31_09265	ASE31_12145	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
KRC14913.1	KRC14911.1	ASE31_09270	ASE31_09260	Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
KRC14913.1	KRC14912.1	ASE31_09270	ASE31_09265	Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
KRC18425.1	KRC14912.1	ASE31_27930	ASE31_09265	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.614
KRC18425.1	KRC19088.1	ASE31_27930	ASE31_05475	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
KRC18425.1	KRC27233.1	ASE31_27930	ASE31_17630	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KRC19088.1	KRC14912.1	ASE31_05475	ASE31_09265	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
KRC19088.1	KRC18425.1	ASE31_05475	ASE31_27930	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
KRC19088.1	KRC23301.1	ASE31_05475	ASE31_01405	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669