STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC12919.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)    
Predicted Functional Partners:
KRC12920.1
Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.856
KRC12921.1
Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.848
KRC12922.1
Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
    0.838
KRC12923.1
Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.597
KRC23576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
KRC23850.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
KRC19865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
KRC28213.1
General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
KRC23462.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
KRC28212.1
General secretion pathway protein GspN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.