KRC12920.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

KRC12920.1

Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)

Predicted Functional Partners:

KRC12919.1

0.856

KRC12921.1

0.847

KRC12922.1

0.708

KRC24807.1

0.694

KRC12902.1

0.647

KRC20814.1

0.637

KRC22490.1

0.590

KRC23415.1

0.585

KRC28107.1

0.573

KRC24806.1

0.557

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC12902.1	KRC12920.1	ASE31_09985	ASE31_10085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRC12902.1	KRC12921.1	ASE31_09985	ASE31_10090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
KRC12902.1	KRC12922.1	ASE31_09985	ASE31_10095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.	0.711
KRC12902.1	KRC23415.1	ASE31_09985	ASE31_02030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
KRC12902.1	KRC24807.1	ASE31_09985	ASE31_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
KRC12902.1	KRC28107.1	ASE31_09985	ASE31_15090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
KRC12919.1	KRC12920.1	ASE31_10080	ASE31_10085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
KRC12919.1	KRC12921.1	ASE31_10080	ASE31_10090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
KRC12919.1	KRC12922.1	ASE31_10080	ASE31_10095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.	0.838
KRC12920.1	KRC12902.1	ASE31_10085	ASE31_09985	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRC12920.1	KRC12919.1	ASE31_10085	ASE31_10080	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
KRC12920.1	KRC12921.1	ASE31_10085	ASE31_10090	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
KRC12920.1	KRC12922.1	ASE31_10085	ASE31_10095	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.	0.708
KRC12920.1	KRC20814.1	ASE31_10085	ASE31_24310	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.637
KRC12920.1	KRC22490.1	ASE31_10085	ASE31_21615	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Teicoplanin resistance protein VanZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
KRC12920.1	KRC23415.1	ASE31_10085	ASE31_02030	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
KRC12920.1	KRC24806.1	ASE31_10085	ASE31_20260	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
KRC12920.1	KRC24807.1	ASE31_10085	ASE31_20265	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
KRC12920.1	KRC28107.1	ASE31_10085	ASE31_15090	Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
KRC12921.1	KRC12902.1	ASE31_10090	ASE31_09985	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514