KRC11805.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KRC11805.1

2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)

Predicted Functional Partners:

KRC11806.1

0.943

KRC19106.1

0.915

KRC12910.1

0.906

KRC23257.1

0.897

KRC24344.1

0.873

KRC26112.1

0.833

KRC17459.1

0.739

KRC27306.1

0.720

KRC27321.1

0.665

KRC23260.1

0.658

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11805.1	KRC11806.1	ASE31_11475	ASE31_11480	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
KRC11805.1	KRC12910.1	ASE31_11475	ASE31_10030	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	0.906
KRC11805.1	KRC17459.1	ASE31_11475	ASE31_30010	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
KRC11805.1	KRC19106.1	ASE31_11475	ASE31_05585	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
KRC11805.1	KRC23257.1	ASE31_11475	ASE31_01155	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
KRC11805.1	KRC23260.1	ASE31_11475	ASE31_01170	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Naphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
KRC11805.1	KRC24344.1	ASE31_11475	ASE31_21225	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
KRC11805.1	KRC26112.1	ASE31_11475	ASE31_18740	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
KRC11805.1	KRC27306.1	ASE31_11475	ASE31_18030	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
KRC11805.1	KRC27321.1	ASE31_11475	ASE31_18110	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase; Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
KRC11806.1	KRC11805.1	ASE31_11480	ASE31_11475	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
KRC11806.1	KRC12910.1	ASE31_11480	ASE31_10030	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	0.969
KRC11806.1	KRC17459.1	ASE31_11480	ASE31_30010	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
KRC11806.1	KRC19106.1	ASE31_11480	ASE31_05585	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC11806.1	KRC23257.1	ASE31_11480	ASE31_01155	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KRC11806.1	KRC23260.1	ASE31_11480	ASE31_01170	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Naphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
KRC11806.1	KRC24344.1	ASE31_11480	ASE31_21225	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
KRC11806.1	KRC26112.1	ASE31_11480	ASE31_18740	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KRC11806.1	KRC27321.1	ASE31_11480	ASE31_18110	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase; Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
KRC12910.1	KRC11805.1	ASE31_10030	ASE31_11475	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906