STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC11852.1Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
KRC11853.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.955
KRC24843.1
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.
 
  
  0.913
KRC23393.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.903
KRC28162.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.900
KRC11851.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.786
KRC11862.1
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.
 
  
  0.773
KRC23187.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.746
KRC14767.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.648
KRC11865.1
D-galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.494
KRC12922.1
Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
  0.476
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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