KRC29494.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

KRC29494.1

Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)

Predicted Functional Partners:

KRC29495.1

0.997

KRC29496.1

0.997

KRC27877.1

0.958

KRC27878.1

0.957

KRC29486.1

0.956

KRC20816.1

0.921

KRC11874.1

0.883

KRC19313.1

0.850

KRC24328.1

0.826

KRC11877.1

0.820

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11874.1	KRC11877.1	ASE31_11885	ASE31_11900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KRC11874.1	KRC19313.1	ASE31_11885	ASE31_06790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC11874.1	KRC20816.1	ASE31_11885	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KRC11874.1	KRC24328.1	ASE31_11885	ASE31_21115	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
KRC11874.1	KRC27877.1	ASE31_11885	ASE31_13815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
KRC11874.1	KRC27878.1	ASE31_11885	ASE31_13820	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
KRC11874.1	KRC29494.1	ASE31_11885	ASE31_12415	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
KRC11874.1	KRC29495.1	ASE31_11885	ASE31_12420	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
KRC11874.1	KRC29496.1	ASE31_11885	ASE31_12425	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
KRC11877.1	KRC11874.1	ASE31_11900	ASE31_11885	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KRC11877.1	KRC19313.1	ASE31_11900	ASE31_06790	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
KRC11877.1	KRC20816.1	ASE31_11900	ASE31_24335	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KRC11877.1	KRC24328.1	ASE31_11900	ASE31_21115	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KRC11877.1	KRC27878.1	ASE31_11900	ASE31_13820	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
KRC11877.1	KRC29494.1	ASE31_11900	ASE31_12415	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
KRC11877.1	KRC29495.1	ASE31_11900	ASE31_12420	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.614
KRC19313.1	KRC11874.1	ASE31_06790	ASE31_11885	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC19313.1	KRC11877.1	ASE31_06790	ASE31_11900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
KRC19313.1	KRC20816.1	ASE31_06790	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC19313.1	KRC27877.1	ASE31_06790	ASE31_13815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664