KRC29545.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KRC29545.1

Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)

Predicted Functional Partners:

KRC23295.1

0.707

KRC23973.1

0.657

KRC22502.1

0.644

KRC23523.1

0.636

KRC28460.1

0.628

KRC23293.1

0.560

KRC18337.1

0.544

KRC14650.1

0.540

KRC23294.1

0.532

KRC27990.1

0.530

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14650.1	KRC29545.1	ASE31_07760	ASE31_12730	Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
KRC18337.1	KRC22502.1	ASE31_27435	ASE31_21690	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
KRC18337.1	KRC23523.1	ASE31_27435	ASE31_02665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
KRC18337.1	KRC28460.1	ASE31_27435	ASE31_12955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
KRC18337.1	KRC29545.1	ASE31_27435	ASE31_12730	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
KRC22502.1	KRC18337.1	ASE31_21690	ASE31_27435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
KRC22502.1	KRC23293.1	ASE31_21690	ASE31_01360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
KRC22502.1	KRC23295.1	ASE31_21690	ASE31_01375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.672
KRC22502.1	KRC23523.1	ASE31_21690	ASE31_02665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
KRC22502.1	KRC23973.1	ASE31_21690	ASE31_01370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
KRC22502.1	KRC29545.1	ASE31_21690	ASE31_12730	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.644
KRC23293.1	KRC22502.1	ASE31_01360	ASE31_21690	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
KRC23293.1	KRC23294.1	ASE31_01360	ASE31_01365	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KRC23293.1	KRC23295.1	ASE31_01360	ASE31_01375	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
KRC23293.1	KRC23973.1	ASE31_01360	ASE31_01370	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KRC23293.1	KRC27990.1	ASE31_01360	ASE31_14445	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
KRC23293.1	KRC28460.1	ASE31_01360	ASE31_12955	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
KRC23293.1	KRC29545.1	ASE31_01360	ASE31_12730	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
KRC23294.1	KRC23293.1	ASE31_01365	ASE31_01360	Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyze the formation of cyanophycin which may act to store excess nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KRC23294.1	KRC23295.1	ASE31_01365	ASE31_01375	Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876