STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC29585.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
KRC23577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.798
KRC25651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.791
KRC25723.1
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.685
KRC23576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.565
KRC29548.1
Benzoylformate decarboxylase; Catalyzes the formation of benzaldehyde from benzoylformate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
       0.554
KRC29547.1
Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
KRC29549.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.416
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.