KRC28455.1 protein (Acidovorax sp. Root217) - STRING interaction network

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gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

KRC28455.1

MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)

Predicted Functional Partners:

KRC27332.1

0.578

KRC25670.1

0.567

KRC25682.1

0.567

KRC28464.1

0.554

rpsA

0.553

vapC

0.423

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC25670.1	KRC25682.1	ASE31_19095	ASE31_19160	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KRC25670.1	KRC27332.1	ASE31_19095	ASE31_18175	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.798
KRC25670.1	KRC28455.1	ASE31_19095	ASE31_12920	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KRC25670.1	rpsA	ASE31_19095	ASE31_08935	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.696
KRC25682.1	KRC25670.1	ASE31_19160	ASE31_19095	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KRC25682.1	KRC27332.1	ASE31_19160	ASE31_18175	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.798
KRC25682.1	KRC28455.1	ASE31_19160	ASE31_12920	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KRC25682.1	rpsA	ASE31_19160	ASE31_08935	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.696
KRC27332.1	KRC25670.1	ASE31_18175	ASE31_19095	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
KRC27332.1	KRC25682.1	ASE31_18175	ASE31_19160	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
KRC27332.1	KRC28455.1	ASE31_18175	ASE31_12920	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
KRC27332.1	rpsA	ASE31_18175	ASE31_08935	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.749
KRC28455.1	KRC25670.1	ASE31_12920	ASE31_19095	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KRC28455.1	KRC25682.1	ASE31_12920	ASE31_19160	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KRC28455.1	KRC27332.1	ASE31_12920	ASE31_18175	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.578
KRC28455.1	KRC28464.1	ASE31_12920	ASE31_12915	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
KRC28455.1	rpsA	ASE31_12920	ASE31_08935	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.553
KRC28455.1	vapC	ASE31_12920	ASE31_12925	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.423
KRC28464.1	KRC28455.1	ASE31_12915	ASE31_12920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
rpsA	KRC25670.1	ASE31_08935	ASE31_19095	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696