KRC28176.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

KRC28176.1

MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)

Predicted Functional Partners:

KRC27793.1

0.847

KRC28175.1

0.792

KRC27792.1

0.689

KRC20348.1

0.432

KRC23497.1

0.425

KRC14858.1

0.422

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14858.1	KRC23497.1	ASE31_08950	ASE31_02495	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
KRC14858.1	KRC28176.1	ASE31_08950	ASE31_13335	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KRC20348.1	KRC28176.1	ASE31_25545	ASE31_13335	mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
KRC23497.1	KRC14858.1	ASE31_02495	ASE31_08950	Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
KRC23497.1	KRC28176.1	ASE31_02495	ASE31_13335	Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
KRC27792.1	KRC27793.1	ASE31_13320	ASE31_13325	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
KRC27792.1	KRC28175.1	ASE31_13320	ASE31_13330	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KRC27792.1	KRC28176.1	ASE31_13320	ASE31_13335	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.689
KRC27793.1	KRC27792.1	ASE31_13325	ASE31_13320	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
KRC27793.1	KRC28175.1	ASE31_13325	ASE31_13330	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KRC27793.1	KRC28176.1	ASE31_13325	ASE31_13335	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
KRC28175.1	KRC27792.1	ASE31_13330	ASE31_13320	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KRC28175.1	KRC27793.1	ASE31_13330	ASE31_13325	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KRC28175.1	KRC28176.1	ASE31_13330	ASE31_13335	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
KRC28176.1	KRC14858.1	ASE31_13335	ASE31_08950	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KRC28176.1	KRC20348.1	ASE31_13335	ASE31_25545	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
KRC28176.1	KRC23497.1	ASE31_13335	ASE31_02495	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
KRC28176.1	KRC27792.1	ASE31_13335	ASE31_13320	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.689
KRC28176.1	KRC27793.1	ASE31_13335	ASE31_13325	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
KRC28176.1	KRC28175.1	ASE31_13335	ASE31_13330	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792