KRC27881.1 protein (Acidovorax sp. Root217) - STRING interaction network

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second shell of interactors

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gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

KRC27881.1

RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)

Predicted Functional Partners:

KRC27882.1

0.956

KRC27883.1

0.813

KRC28128.1

0.733

KRC23685.1

0.705

KRC28127.1

0.661

KRC27941.1

0.466

KRC17866.1

0.429

KRC23273.1

0.405

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC17866.1	KRC27881.1	ASE31_29140	ASE31_13835	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
KRC17866.1	KRC28128.1	ASE31_29140	ASE31_15210	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
KRC23273.1	KRC27881.1	ASE31_01240	ASE31_13835	2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
KRC23685.1	KRC27881.1	ASE31_03590	ASE31_13835	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KRC23685.1	KRC27941.1	ASE31_03590	ASE31_14170	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.440
KRC23685.1	KRC28128.1	ASE31_03590	ASE31_15210	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
KRC27881.1	KRC17866.1	ASE31_13835	ASE31_29140	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
KRC27881.1	KRC23273.1	ASE31_13835	ASE31_01240	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
KRC27881.1	KRC23685.1	ASE31_13835	ASE31_03590	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.705
KRC27881.1	KRC27882.1	ASE31_13835	ASE31_13840	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.956
KRC27881.1	KRC27883.1	ASE31_13835	ASE31_13845	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
KRC27881.1	KRC27941.1	ASE31_13835	ASE31_14170	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.466
KRC27881.1	KRC28127.1	ASE31_13835	ASE31_15205	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.661
KRC27881.1	KRC28128.1	ASE31_13835	ASE31_15210	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
KRC27882.1	KRC27881.1	ASE31_13840	ASE31_13835	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
KRC27882.1	KRC27883.1	ASE31_13840	ASE31_13845	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
KRC27882.1	KRC28128.1	ASE31_13840	ASE31_15210	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
KRC27883.1	KRC27881.1	ASE31_13845	ASE31_13835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
KRC27883.1	KRC27882.1	ASE31_13845	ASE31_13840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.755
KRC27941.1	KRC23685.1	ASE31_14170	ASE31_03590	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.440