KRC27886.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

KRC27886.1

Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)

Predicted Functional Partners:

KRC27885.1

0.906

KRC27884.1

0.823

KRC20799.1

0.664

KRC27887.1

0.640

KRC27877.1

0.503

KRC20329.1

0.472

KRC27888.1

0.450

KRC16839.1

0.431

KRC27878.1

0.427

KRC24913.1

0.405

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC16839.1	KRC20799.1	ASE31_06915	ASE31_24235	Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KRC16839.1	KRC27886.1	ASE31_06915	ASE31_13860	Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
KRC20329.1	KRC24913.1	ASE31_25435	ASE31_20230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
KRC20329.1	KRC27885.1	ASE31_25435	ASE31_13855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
KRC20329.1	KRC27886.1	ASE31_25435	ASE31_13860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
KRC20799.1	KRC16839.1	ASE31_24235	ASE31_06915	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KRC20799.1	KRC27884.1	ASE31_24235	ASE31_13850	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRC20799.1	KRC27885.1	ASE31_24235	ASE31_13855	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
KRC20799.1	KRC27886.1	ASE31_24235	ASE31_13860	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KRC24913.1	KRC20329.1	ASE31_20230	ASE31_25435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
KRC24913.1	KRC27886.1	ASE31_20230	ASE31_13860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
KRC27877.1	KRC27878.1	ASE31_13815	ASE31_13820	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KRC27877.1	KRC27885.1	ASE31_13815	ASE31_13855	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
KRC27877.1	KRC27886.1	ASE31_13815	ASE31_13860	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
KRC27878.1	KRC27877.1	ASE31_13820	ASE31_13815	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KRC27878.1	KRC27885.1	ASE31_13820	ASE31_13855	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
KRC27878.1	KRC27886.1	ASE31_13820	ASE31_13860	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
KRC27884.1	KRC20799.1	ASE31_13850	ASE31_24235	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRC27884.1	KRC27885.1	ASE31_13850	ASE31_13855	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
KRC27884.1	KRC27886.1	ASE31_13850	ASE31_13860	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823