KRC27925.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

KRC27925.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)

Predicted Functional Partners:

KRC27927.1

0.964

KRC27926.1

0.935

KRC28149.1

0.908

KRC19098.1

0.905

KRC19283.1

0.898

KRC15020.1

0.778

KRC23590.1

0.740

KRC24746.1

0.732

KRC23690.1

0.730

KRC27924.1

0.690

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC15020.1	KRC19098.1	ASE31_08790	ASE31_05525	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
KRC15020.1	KRC19283.1	ASE31_08790	ASE31_06625	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KRC15020.1	KRC23690.1	ASE31_08790	ASE31_03620	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
KRC15020.1	KRC27925.1	ASE31_08790	ASE31_14085	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
KRC15020.1	KRC27926.1	ASE31_08790	ASE31_14090	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.865
KRC15020.1	KRC27927.1	ASE31_08790	ASE31_14095	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
KRC15020.1	KRC28149.1	ASE31_08790	ASE31_15365	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KRC19098.1	KRC15020.1	ASE31_05525	ASE31_08790	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
KRC19098.1	KRC19283.1	ASE31_05525	ASE31_06625	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
KRC19098.1	KRC27925.1	ASE31_05525	ASE31_14085	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KRC19098.1	KRC27926.1	ASE31_05525	ASE31_14090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.844
KRC19283.1	KRC15020.1	ASE31_06625	ASE31_08790	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KRC19283.1	KRC19098.1	ASE31_06625	ASE31_05525	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
KRC19283.1	KRC23590.1	ASE31_06625	ASE31_03065	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KRC19283.1	KRC23690.1	ASE31_06625	ASE31_03620	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
KRC19283.1	KRC24746.1	ASE31_06625	ASE31_19920	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KRC19283.1	KRC27925.1	ASE31_06625	ASE31_14085	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
KRC19283.1	KRC27926.1	ASE31_06625	ASE31_14090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.532
KRC19283.1	KRC27927.1	ASE31_06625	ASE31_14095	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
KRC19283.1	KRC28149.1	ASE31_06625	ASE31_15365	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539