KRC27927.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC27927.1

Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)

Predicted Functional Partners:

KRC27925.1

0.964

KRC28150.1

0.895

KRC19282.1

0.881

KRC19097.1

0.871

KRC27926.1

0.825

KRC23382.1

0.705

KRC28221.1

0.571

KRC27924.1

0.550

KRC19283.1

0.541

KRC19281.1

0.516

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC19097.1	KRC19281.1	ASE31_05520	ASE31_06615	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.878
KRC19097.1	KRC19282.1	ASE31_05520	ASE31_06620	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC19097.1	KRC19283.1	ASE31_05520	ASE31_06625	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
KRC19097.1	KRC23382.1	ASE31_05520	ASE31_01855	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.728
KRC19097.1	KRC27925.1	ASE31_05520	ASE31_14085	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
KRC19097.1	KRC27926.1	ASE31_05520	ASE31_14090	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.902
KRC19097.1	KRC27927.1	ASE31_05520	ASE31_14095	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
KRC19097.1	KRC28221.1	ASE31_05520	ASE31_15375	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.877
KRC19281.1	KRC19097.1	ASE31_06615	ASE31_05520	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
KRC19281.1	KRC19282.1	ASE31_06615	ASE31_06620	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KRC19281.1	KRC19283.1	ASE31_06615	ASE31_06625	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
KRC19281.1	KRC23382.1	ASE31_06615	ASE31_01855	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
KRC19281.1	KRC27925.1	ASE31_06615	ASE31_14085	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
KRC19281.1	KRC27927.1	ASE31_06615	ASE31_14095	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
KRC19281.1	KRC28150.1	ASE31_06615	ASE31_15370	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
KRC19282.1	KRC19097.1	ASE31_06620	ASE31_05520	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC19282.1	KRC19281.1	ASE31_06620	ASE31_06615	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.976
KRC19282.1	KRC19283.1	ASE31_06620	ASE31_06625	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KRC19282.1	KRC27925.1	ASE31_06620	ASE31_14085	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
KRC19282.1	KRC27926.1	ASE31_06620	ASE31_14090	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.913