KRC27930.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KRC27930.1

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)

Predicted Functional Partners:

KRC27931.1

0.972

KRC28190.1

0.947

KRC19313.1

0.882

KRC11912.1

0.864

KRC24328.1

0.859

KRC20816.1

0.855

KRC27878.1

0.848

KRC29495.1

0.845

KRC11874.1

0.815

KRC27929.1

0.792

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11874.1	KRC11912.1	ASE31_11885	ASE31_11715	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
KRC11874.1	KRC19313.1	ASE31_11885	ASE31_06790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC11874.1	KRC20816.1	ASE31_11885	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KRC11874.1	KRC24328.1	ASE31_11885	ASE31_21115	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
KRC11874.1	KRC27878.1	ASE31_11885	ASE31_13820	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
KRC11874.1	KRC27929.1	ASE31_11885	ASE31_14105	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
KRC11874.1	KRC27930.1	ASE31_11885	ASE31_14115	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
KRC11874.1	KRC27931.1	ASE31_11885	ASE31_14120	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
KRC11874.1	KRC28190.1	ASE31_11885	ASE31_14110	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
KRC11874.1	KRC29495.1	ASE31_11885	ASE31_12420	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
KRC11912.1	KRC11874.1	ASE31_11715	ASE31_11885	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
KRC11912.1	KRC19313.1	ASE31_11715	ASE31_06790	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
KRC11912.1	KRC20816.1	ASE31_11715	ASE31_24335	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
KRC11912.1	KRC24328.1	ASE31_11715	ASE31_21115	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
KRC11912.1	KRC27929.1	ASE31_11715	ASE31_14105	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
KRC11912.1	KRC27930.1	ASE31_11715	ASE31_14115	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
KRC11912.1	KRC27931.1	ASE31_11715	ASE31_14120	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
KRC11912.1	KRC28190.1	ASE31_11715	ASE31_14110	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
KRC19313.1	KRC11874.1	ASE31_06790	ASE31_11885	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC19313.1	KRC11912.1	ASE31_06790	ASE31_11715	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454