STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC27997.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
KRC28002.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
KRC27996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
KRC28001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
KRC27999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.824
KRC28000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.810
KRC27998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
KRC28005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.698
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.652
KRC27207.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.646
KRC20864.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.646
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.