KRC28063.1 protein (Acidovorax sp. Root217) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC28063.1

Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)

Predicted Functional Partners:

KRC28064.1

0.996

KRC28062.1

0.991

KRC28061.1

0.979

KRC20909.1

0.970

KRC22515.1

0.959

ASE31_25280

0.959

glnQ

0.958

KRC26929.1

0.956

KRC26998.1

0.956

KRC25132.1

0.951

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE31_25280	KRC20909.1	ASE31_25280	ASE31_24875	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
ASE31_25280	KRC25132.1	ASE31_25280	ASE31_19555	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
ASE31_25280	KRC28061.1	ASE31_25280	ASE31_14830	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
ASE31_25280	KRC28062.1	ASE31_25280	ASE31_14835	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
ASE31_25280	KRC28063.1	ASE31_25280	ASE31_14840	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
KRC20909.1	ASE31_25280	ASE31_24875	ASE31_25280	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
KRC20909.1	KRC22515.1	ASE31_24875	ASE31_21770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
KRC20909.1	KRC26929.1	ASE31_24875	ASE31_15890	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
KRC20909.1	KRC26998.1	ASE31_24875	ASE31_16285	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
KRC20909.1	KRC28062.1	ASE31_24875	ASE31_14835	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.861
KRC20909.1	KRC28063.1	ASE31_24875	ASE31_14840	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KRC20909.1	KRC28064.1	ASE31_24875	ASE31_14845	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
KRC20909.1	glnQ	ASE31_24875	ASE31_19265	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
KRC22515.1	KRC20909.1	ASE31_21770	ASE31_24875	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
KRC22515.1	KRC25132.1	ASE31_21770	ASE31_19555	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
KRC22515.1	KRC28061.1	ASE31_21770	ASE31_14830	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
KRC22515.1	KRC28062.1	ASE31_21770	ASE31_14835	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
KRC22515.1	KRC28063.1	ASE31_21770	ASE31_14840	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
KRC25132.1	ASE31_25280	ASE31_19555	ASE31_25280	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
KRC25132.1	KRC22515.1	ASE31_19555	ASE31_21770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635