KRC26950.1 protein (Acidovorax sp. Root217) - STRING interaction network

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gene neighborhood

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textmining

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protein homology

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[Homology]

Score

KRC26950.1

DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)

Predicted Functional Partners:

KRC26951.1

0.996

KRC26952.1

0.967

KRC26953.1

0.942

KRC27405.1

0.927

KRC27130.1

0.927

KRC21404.1

0.927

rpoB

0.905

rpoZ

0.891

polA

0.879

ligD

0.877

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC21404.1	KRC26950.1	ASE31_23350	ASE31_16015	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KRC21404.1	rpoB	ASE31_23350	ASE31_13020	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.878
KRC21404.1	rpoZ	ASE31_23350	ASE31_30685	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.834
KRC26950.1	KRC21404.1	ASE31_16015	ASE31_23350	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KRC26950.1	KRC26951.1	ASE31_16015	ASE31_16020	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC26950.1	KRC26952.1	ASE31_16015	ASE31_16025	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KRC26950.1	KRC26953.1	ASE31_16015	ASE31_16030	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
KRC26950.1	KRC27130.1	ASE31_16015	ASE31_17005	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KRC26950.1	KRC27405.1	ASE31_16015	ASE31_17000	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KRC26950.1	ligD	ASE31_16015	ASE31_23245	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
KRC26950.1	polA	ASE31_16015	ASE31_03465	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.879
KRC26950.1	rpoB	ASE31_16015	ASE31_13020	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.905
KRC26950.1	rpoZ	ASE31_16015	ASE31_30685	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.891
KRC26951.1	KRC26950.1	ASE31_16020	ASE31_16015	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC26951.1	KRC26952.1	ASE31_16020	ASE31_16025	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
KRC26951.1	KRC26953.1	ASE31_16020	ASE31_16030	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KRC26951.1	ligD	ASE31_16020	ASE31_23245	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
KRC26951.1	polA	ASE31_16020	ASE31_03465	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.978
KRC26951.1	rpoB	ASE31_16020	ASE31_13020	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.743
KRC26952.1	KRC26950.1	ASE31_16025	ASE31_16015	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967