STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC26991.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
KRC25659.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
ASE31_25610
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.722
KRC26990.1
PLP-dependent lyase/thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.719
KRC26989.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
KRC23684.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.622
KRC17573.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.616
KRC27330.1
Ribulose 1,5-bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RuBisCO large chain family.
  
 
 0.567
KRC26992.1
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
  
    0.557
KRC12870.1
citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
   
    0.528
KRC29567.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
   
    0.528
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.