KRC27030.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

Coexpression

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[Homology]

Score

KRC27030.1

Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)

Predicted Functional Partners:

KRC27037.1

0.788

KRC27029.1

0.610

KRC26072.1

0.480

KRC27400.1

0.454

KRC27028.1

0.454

KRC26913.1

0.415

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC26072.1	KRC27030.1	ASE31_18510	ASE31_16475	Glyxoylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
KRC26072.1	KRC27037.1	ASE31_18510	ASE31_16510	Glyxoylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.561
KRC26913.1	KRC27030.1	ASE31_15800	ASE31_16475	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRC26913.1	KRC27037.1	ASE31_15800	ASE31_16510	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.523
KRC27028.1	KRC27029.1	ASE31_16465	ASE31_16470	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582
KRC27028.1	KRC27030.1	ASE31_16465	ASE31_16475	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
KRC27028.1	KRC27400.1	ASE31_16465	ASE31_16460	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
KRC27029.1	KRC27028.1	ASE31_16470	ASE31_16465	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582
KRC27029.1	KRC27030.1	ASE31_16470	ASE31_16475	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KRC27029.1	KRC27400.1	ASE31_16470	ASE31_16460	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
KRC27030.1	KRC26072.1	ASE31_16475	ASE31_18510	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyxoylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
KRC27030.1	KRC26913.1	ASE31_16475	ASE31_15800	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRC27030.1	KRC27028.1	ASE31_16475	ASE31_16465	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
KRC27030.1	KRC27029.1	ASE31_16475	ASE31_16470	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KRC27030.1	KRC27037.1	ASE31_16475	ASE31_16510	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.788
KRC27030.1	KRC27400.1	ASE31_16475	ASE31_16460	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
KRC27037.1	KRC26072.1	ASE31_16510	ASE31_18510	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	Glyxoylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KRC27037.1	KRC26913.1	ASE31_16510	ASE31_15800	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KRC27037.1	KRC27030.1	ASE31_16510	ASE31_16475	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
KRC27400.1	KRC27028.1	ASE31_16460	ASE31_16465	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786