KRC27132.1 protein (Acidovorax sp. Root217) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC27132.1

LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)

Predicted Functional Partners:

lptA

0.996

KRC18233.1

0.995

KRC20891.1

0.991

KRC20890.1

0.989

KRC27133.1

0.889

KRC27131.1

0.832

KRC27134.1

0.784

KRC23660.1

0.747

KRC16863.1

0.740

KRC24807.1

0.731

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC16863.1	KRC23660.1	ASE31_07075	ASE31_03450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
KRC16863.1	KRC24807.1	ASE31_07075	ASE31_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
KRC16863.1	KRC27132.1	ASE31_07075	ASE31_17015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
KRC16863.1	lptA	ASE31_07075	ASE31_26830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.561
KRC18233.1	KRC20890.1	ASE31_26835	ASE31_24770	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC18233.1	KRC20891.1	ASE31_26835	ASE31_24775	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC18233.1	KRC27132.1	ASE31_26835	ASE31_17015	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KRC18233.1	KRC27133.1	ASE31_26835	ASE31_17020	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
KRC18233.1	KRC27134.1	ASE31_26835	ASE31_17025	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.	0.743
KRC18233.1	lptA	ASE31_26835	ASE31_26830	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.986
KRC20890.1	KRC18233.1	ASE31_24770	ASE31_26835	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC20890.1	KRC20891.1	ASE31_24770	ASE31_24775	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC20890.1	KRC27132.1	ASE31_24770	ASE31_17015	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
KRC20890.1	lptA	ASE31_24770	ASE31_26830	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.476
KRC20891.1	KRC18233.1	ASE31_24775	ASE31_26835	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC20891.1	KRC20890.1	ASE31_24775	ASE31_24770	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC20891.1	KRC27132.1	ASE31_24775	ASE31_17015	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KRC20891.1	KRC27134.1	ASE31_24775	ASE31_17025	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.	0.494
KRC20891.1	lptA	ASE31_24775	ASE31_26830	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.471
KRC23660.1	KRC16863.1	ASE31_03450	ASE31_07075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707