STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC27413.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (858 aa)    
Predicted Functional Partners:
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.953
KRC27162.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.931
KRC27165.1
PBS lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.836
KRC27166.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
KRC27414.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.827
erpA
Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters.
    
 
 0.721
iscA
Iron-sulfur cluster assembly protein IscA; Forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
    
 
 0.721
KRC26920.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
    
  0.718
KRC23306.1
DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
KRC18164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.592
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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