STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC27427.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
KRC27267.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KRC14837.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
KRC27266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.485
KRC14692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
KRC20925.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
KRC24390.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
KRC23378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
KRC27196.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
KRC27273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.408
KRC14921.1
DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.