KRC25656.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC25656.1

Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (716 aa)

Predicted Functional Partners:

KRC12949.1

0.862

KRC19171.1

0.861

KRC21905.1

0.861

KRC17491.1

0.832

KRC16836.1

0.817

KRC24302.1

0.787

KRC20847.1

0.763

KRC20971.1

0.759

KRC14721.1

0.751

KRC29450.1

0.750

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC12949.1	KRC14721.1	ASE31_10250	ASE31_08160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
KRC12949.1	KRC16836.1	ASE31_10250	ASE31_06895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRC12949.1	KRC17491.1	ASE31_10250	ASE31_30220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KRC12949.1	KRC19171.1	ASE31_10250	ASE31_05955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
KRC12949.1	KRC20847.1	ASE31_10250	ASE31_24520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
KRC12949.1	KRC20971.1	ASE31_10250	ASE31_23735	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
KRC12949.1	KRC21905.1	ASE31_10250	ASE31_22680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
KRC12949.1	KRC24302.1	ASE31_10250	ASE31_20975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KRC12949.1	KRC25656.1	ASE31_10250	ASE31_19005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
KRC12949.1	KRC29450.1	ASE31_10250	ASE31_12145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KRC14721.1	KRC12949.1	ASE31_08160	ASE31_10250	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
KRC14721.1	KRC16836.1	ASE31_08160	ASE31_06895	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14721.1	KRC17491.1	ASE31_08160	ASE31_30220	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRC14721.1	KRC19171.1	ASE31_08160	ASE31_05955	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KRC14721.1	KRC20847.1	ASE31_08160	ASE31_24520	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
KRC14721.1	KRC20971.1	ASE31_08160	ASE31_23735	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
KRC14721.1	KRC21905.1	ASE31_08160	ASE31_22680	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KRC14721.1	KRC24302.1	ASE31_08160	ASE31_20975	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KRC14721.1	KRC25656.1	ASE31_08160	ASE31_19005	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
KRC14721.1	KRC29450.1	ASE31_08160	ASE31_12145	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999