KRC24763.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KRC24763.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)

Predicted Functional Partners:

KRC24764.1

0.817

KRC24765.1

0.781

KRC24762.1

0.773

KRC24766.1

0.709

KRC24909.1

0.510

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC24762.1	KRC24763.1	ASE31_20010	ASE31_20015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC24762.1	KRC24764.1	ASE31_20010	ASE31_20020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC24762.1	KRC24765.1	ASE31_20010	ASE31_20025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KRC24762.1	KRC24766.1	ASE31_20010	ASE31_20030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KRC24762.1	KRC24909.1	ASE31_20010	ASE31_20005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC24763.1	KRC24762.1	ASE31_20015	ASE31_20010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.773
KRC24763.1	KRC24764.1	ASE31_20015	ASE31_20020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KRC24763.1	KRC24765.1	ASE31_20015	ASE31_20025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
KRC24763.1	KRC24766.1	ASE31_20015	ASE31_20030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KRC24763.1	KRC24909.1	ASE31_20015	ASE31_20005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC24764.1	KRC24762.1	ASE31_20020	ASE31_20010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.773
KRC24764.1	KRC24763.1	ASE31_20020	ASE31_20015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KRC24764.1	KRC24765.1	ASE31_20020	ASE31_20025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
KRC24764.1	KRC24766.1	ASE31_20020	ASE31_20030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KRC24764.1	KRC24909.1	ASE31_20020	ASE31_20005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC24765.1	KRC24762.1	ASE31_20025	ASE31_20010	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.773
KRC24765.1	KRC24763.1	ASE31_20025	ASE31_20015	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
KRC24765.1	KRC24764.1	ASE31_20025	ASE31_20020	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
KRC24765.1	KRC24766.1	ASE31_20025	ASE31_20030	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KRC24765.1	KRC24909.1	ASE31_20025	ASE31_20005	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603