KRC24910.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

KRC24910.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)

Predicted Functional Partners:

KRC14952.1

0.528

KRC24735.1

0.523

KRC25718.1

0.514

KRC28134.1

0.505

KRC24737.1

0.474

KRC24777.1

0.472

KRC27063.1

0.450

KRC20934.1

0.420

KRC24774.1

0.418

KRC24773.1

0.415

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14952.1	KRC24910.1	ASE31_09495	ASE31_20090	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KRC20934.1	KRC24910.1	ASE31_25030	ASE31_20090	Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
KRC24735.1	KRC24737.1	ASE31_19865	ASE31_19875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
KRC24735.1	KRC24910.1	ASE31_19865	ASE31_20090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KRC24735.1	KRC28134.1	ASE31_19865	ASE31_15250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
KRC24737.1	KRC24735.1	ASE31_19875	ASE31_19865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
KRC24737.1	KRC24910.1	ASE31_19875	ASE31_20090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
KRC24737.1	KRC28134.1	ASE31_19875	ASE31_15250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
KRC24773.1	KRC24774.1	ASE31_20065	ASE31_20070	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KRC24773.1	KRC24777.1	ASE31_20065	ASE31_20085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
KRC24773.1	KRC24910.1	ASE31_20065	ASE31_20090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRC24774.1	KRC24773.1	ASE31_20070	ASE31_20065	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KRC24774.1	KRC24777.1	ASE31_20070	ASE31_20085	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
KRC24774.1	KRC24910.1	ASE31_20070	ASE31_20090	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
KRC24777.1	KRC24773.1	ASE31_20085	ASE31_20065	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
KRC24777.1	KRC24774.1	ASE31_20085	ASE31_20070	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
KRC24777.1	KRC24910.1	ASE31_20085	ASE31_20090	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
KRC24910.1	KRC14952.1	ASE31_20090	ASE31_09495	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KRC24910.1	KRC20934.1	ASE31_20090	ASE31_25030	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
KRC24910.1	KRC24735.1	ASE31_20090	ASE31_19865	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523