STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC24879.1Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
KRC20825.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
KRC14846.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRC14961.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRC24891.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 
 0.517
KRC24880.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.503
KRC22620.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.458
nnrE
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
   
    0.447
KRC24878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.445
KRC20982.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.443
KRC28187.1
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.426
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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