KRC24337.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

KRC24337.1

Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)

Predicted Functional Partners:

KRC24339.1

0.929

KRC24338.1

0.927

KRC24409.1

0.739

KRC16836.1

0.633

KRC20816.1

0.622

KRC12849.1

0.611

KRC19313.1

0.578

KRC11878.1

0.578

KRC20363.1

0.578

KRC11874.1

0.558

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11874.1	KRC11878.1	ASE31_11885	ASE31_11905	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
KRC11874.1	KRC12849.1	ASE31_11885	ASE31_10530	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
KRC11874.1	KRC19313.1	ASE31_11885	ASE31_06790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC11874.1	KRC20363.1	ASE31_11885	ASE31_25635	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KRC11874.1	KRC20816.1	ASE31_11885	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KRC11874.1	KRC24337.1	ASE31_11885	ASE31_21160	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
KRC11874.1	KRC24338.1	ASE31_11885	ASE31_21165	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KRC11874.1	KRC24339.1	ASE31_11885	ASE31_21170	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525
KRC11874.1	KRC24409.1	ASE31_11885	ASE31_21260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
KRC11878.1	KRC11874.1	ASE31_11905	ASE31_11885	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
KRC11878.1	KRC19313.1	ASE31_11905	ASE31_06790	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
KRC11878.1	KRC20816.1	ASE31_11905	ASE31_24335	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KRC11878.1	KRC24337.1	ASE31_11905	ASE31_21160	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
KRC11878.1	KRC24338.1	ASE31_11905	ASE31_21165	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KRC12849.1	KRC11874.1	ASE31_10530	ASE31_11885	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
KRC12849.1	KRC19313.1	ASE31_10530	ASE31_06790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
KRC12849.1	KRC20816.1	ASE31_10530	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC12849.1	KRC24337.1	ASE31_10530	ASE31_21160	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.611
KRC12849.1	KRC24338.1	ASE31_10530	ASE31_21165	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
KRC12849.1	KRC24339.1	ASE31_10530	ASE31_21170	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400