KRC24408.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

KRC24408.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)

Predicted Functional Partners:

KRC24409.1

0.919

KRC24349.1

0.913

KRC24350.1

0.797

KRC24348.1

0.772

KRC24346.1

0.747

KRC24339.1

0.699

KRC24345.1

0.678

KRC12849.1

0.665

KRC16836.1

0.633

KRC20816.1

0.631

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC12849.1	KRC20816.1	ASE31_10530	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC12849.1	KRC24339.1	ASE31_10530	ASE31_21170	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KRC12849.1	KRC24349.1	ASE31_10530	ASE31_21255	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
KRC12849.1	KRC24408.1	ASE31_10530	ASE31_21250	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
KRC16836.1	KRC24408.1	ASE31_06895	ASE31_21250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
KRC20816.1	KRC12849.1	ASE31_24335	ASE31_10530	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
KRC20816.1	KRC24339.1	ASE31_24335	ASE31_21170	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KRC20816.1	KRC24349.1	ASE31_24335	ASE31_21255	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
KRC20816.1	KRC24408.1	ASE31_24335	ASE31_21250	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
KRC20816.1	KRC24409.1	ASE31_24335	ASE31_21260	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
KRC24339.1	KRC12849.1	ASE31_21170	ASE31_10530	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KRC24339.1	KRC20816.1	ASE31_21170	ASE31_24335	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KRC24339.1	KRC24349.1	ASE31_21170	ASE31_21255	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KRC24339.1	KRC24408.1	ASE31_21170	ASE31_21250	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
KRC24339.1	KRC24409.1	ASE31_21170	ASE31_21260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRC24345.1	KRC24346.1	ASE31_21230	ASE31_21235	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
KRC24345.1	KRC24348.1	ASE31_21230	ASE31_21245	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Creatinine amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC24345.1	KRC24349.1	ASE31_21230	ASE31_21255	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
KRC24345.1	KRC24350.1	ASE31_21230	ASE31_21265	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KRC24345.1	KRC24408.1	ASE31_21230	ASE31_21250	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678