STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC22509.1Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)    
Predicted Functional Partners:
KRC24797.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.924
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.893
KRC23336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
KRC23642.1
Cellulose synthase; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
    
 0.887
KRC11754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
KRC27980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
KRC11790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.806
KRC23418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.780
KRC14924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.780
KRC12895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.780
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.