STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC22542.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
KRC22546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
KRC22545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
KRC23301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
ASE31_25345
Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.652
KRC22543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
KRC22544.1
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.589
KRC21462.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
KRC18343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
KRC14729.1
Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
KRC27356.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.