STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC22552.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
KRC22551.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.943
KRC20426.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.755
KRC22643.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.713
KRC22553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.556
KRC27187.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.470
KRC27762.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
KRC19134.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
KRC23883.1
Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.419
KRC28154.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
KRC12669.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.