STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC21979.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)    
Predicted Functional Partners:
KRC22002.1
3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.
 
     0.636
KRC24891.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.625
ligD
ATP-dependent DNA ligase; Catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.587
KRC24872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.575
KRC24866.1
DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.570
KRC23678.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
    0.546
KRC24890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.509
KRC21457.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
KRC21978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
KRC16063.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.436
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.