KRC20714.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC20714.1

Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)

Predicted Functional Partners:

KRC24891.1

0.810

KRC23678.1

0.807

KRC20713.1

0.781

KRC27766.1

0.777

KRC20715.1

0.747

KRC20870.1

0.737

KRC20385.1

0.718

KRC17643.1

0.715

KRC14885.1

0.712

KRC28034.1

0.712

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14885.1	KRC17643.1	ASE31_09110	ASE31_29695	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
KRC14885.1	KRC20385.1	ASE31_09110	ASE31_25760	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
KRC14885.1	KRC20714.1	ASE31_09110	ASE31_23755	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KRC14885.1	KRC20870.1	ASE31_09110	ASE31_24660	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KRC14885.1	KRC24891.1	ASE31_09110	ASE31_20725	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.433
KRC14885.1	KRC27766.1	ASE31_09110	ASE31_13155	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbamoyl-phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KRC14885.1	KRC28034.1	ASE31_09110	ASE31_14675	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
KRC17643.1	KRC14885.1	ASE31_29695	ASE31_09110	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
KRC17643.1	KRC20714.1	ASE31_29695	ASE31_23755	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
KRC17643.1	KRC28034.1	ASE31_29695	ASE31_14675	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
KRC20385.1	KRC14885.1	ASE31_25760	ASE31_09110	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
KRC20385.1	KRC20714.1	ASE31_25760	ASE31_23755	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
KRC20385.1	KRC20870.1	ASE31_25760	ASE31_24660	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
KRC20385.1	KRC27766.1	ASE31_25760	ASE31_13155	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbamoyl-phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KRC20385.1	KRC28034.1	ASE31_25760	ASE31_14675	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
KRC20713.1	KRC20714.1	ASE31_23750	ASE31_23755	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
KRC20713.1	KRC20715.1	ASE31_23750	ASE31_23760	MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KRC20714.1	KRC14885.1	ASE31_23755	ASE31_09110	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KRC20714.1	KRC17643.1	ASE31_23755	ASE31_29695	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
KRC20714.1	KRC20385.1	ASE31_23755	ASE31_25760	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718