KRC20733.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KRC20733.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)

Predicted Functional Partners:

KRC20735.1

0.744

KRC20736.1

0.727

KRC20734.1

0.708

ASE31_23865

0.660

KRC20737.1

0.421

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE31_23865	KRC20733.1	ASE31_23865	ASE31_23870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
ASE31_23865	KRC20734.1	ASE31_23865	ASE31_23875	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
ASE31_23865	KRC20735.1	ASE31_23865	ASE31_23880	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
ASE31_23865	KRC20736.1	ASE31_23865	ASE31_23885	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
KRC20733.1	ASE31_23865	ASE31_23870	ASE31_23865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
KRC20733.1	KRC20734.1	ASE31_23870	ASE31_23875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC20733.1	KRC20735.1	ASE31_23870	ASE31_23880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
KRC20733.1	KRC20736.1	ASE31_23870	ASE31_23885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
KRC20733.1	KRC20737.1	ASE31_23870	ASE31_23890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
KRC20734.1	ASE31_23865	ASE31_23875	ASE31_23865	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
KRC20734.1	KRC20733.1	ASE31_23875	ASE31_23870	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC20734.1	KRC20735.1	ASE31_23875	ASE31_23880	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KRC20734.1	KRC20736.1	ASE31_23875	ASE31_23885	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
KRC20734.1	KRC20737.1	ASE31_23875	ASE31_23890	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
KRC20735.1	ASE31_23865	ASE31_23880	ASE31_23865	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KRC20735.1	KRC20733.1	ASE31_23880	ASE31_23870	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
KRC20735.1	KRC20734.1	ASE31_23880	ASE31_23875	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KRC20735.1	KRC20736.1	ASE31_23880	ASE31_23885	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
KRC20735.1	KRC20737.1	ASE31_23880	ASE31_23890	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
KRC20736.1	ASE31_23865	ASE31_23885	ASE31_23865	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738