STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC20791.1General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (59 aa)    
Predicted Functional Partners:
KRC17002.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.789
KRC23620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.719
KRC22502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.636
KRC27961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
KRC28040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
     0.625
KRC28460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.602
KRC19134.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
KRC27045.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.558
KRC21457.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.558
KRC23342.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.