STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD23328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
KRD08797.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.526
KRD19377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.490
KRD16200.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.440
KRD23286.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.421
KRC95768.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.415
KRD15440.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.415
Your Current Organism:
Streptomyces sp. Root264
NCBI taxonomy Id: 1736503
Other names: S. sp. Root264
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