STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD13727.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (748 aa)    
Predicted Functional Partners:
KRD06169.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.940
KRD20066.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.932
KRD19908.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.912
KRD09216.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.906
KRD13725.1
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.868
KRD13726.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
KRD21020.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.787
KRD23032.1
Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.786
KRD17533.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.778
KRD22837.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
Your Current Organism:
Streptomyces sp. Root264
NCBI taxonomy Id: 1736503
Other names: S. sp. Root264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.