STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD20830.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
KRD20391.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
KRD20393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
KRD20392.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KRD20390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.604
KRD20394.1
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
KRD20395.1
Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
KRD20831.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
sufC
Fe-S cluster assembly ATPase SufC; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
KRD20389.1
DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
KRD20397.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.456
Your Current Organism:
Mycobacterium sp. Root265
NCBI taxonomy Id: 1736504
Other names: M. sp. Root265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.